blt(1)

NAME

blt - Wrapper for all biolibc-tools subcommands

SYNOPSIS

blt subcommand arguments

DESCRIPTION
blt is a wrapper for biolibc-tools subcommands, which are installed in a private directory in order to avoid conflicts with other programs bearing the same name.
awk -F '\t' '{ printf("%s\n%s\n", $1, $2); }' \
    file.tsv > file.fasta
awk -F '\t' '{ printf("%s\n%s\n%s\n%s\n", $1, $2, $3, $4); }' \
    file.tsv > file.fastq

EXAMPLES
blt version
blt fastx2tsv < file.fastq > file.tsv
blt fastx2tsv < file.fasta > file.tsv
blt fastx-derep < file.fastq > filtered-file.fastq
blt fastx-derep < file.fasta > filtered-file.fasta
blt fasta2seq < file.fasta | blt find-orfs
blt vcf-search chr1 23244 < file.vcf
blt chrom-lens < file.fasta

SEE ALSO
blt-<subcommand>(1), e.g. blt-fastx2tsv(1), blt-fastx-derep(1), etc.

AUTHOR
J. Bacon